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  <title></title>
  <name first="Alan" middle="" last="Barr"></name>
  <organization>University of Oxford (GB)</organization>
  <email>alan.barr@cern.ch</email>
  <userid>19868</userid>
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<title>CHEP04</title>
<description>These are the Web pages providing information for the upcoming Computing in High Energy Physics (CHEP) conference in September 2004.

CHEP conferences provide an international forum to exchange information on computing experience and needs for the High Energy Physics community, and to review recent, ongoing and future activities.

CHEP conferences are held every 18 months, the previous one being held in San Diego in March 2003.</description>
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 <name>Interlaken, Switzerland</name>
 <address></address>
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<startDate>2004-09-27T08:30:00</startDate>
<endDate>2004-10-01T18:00:00</endDate>
<creationDate>2004-02-03T15:53:31</creationDate>
<modificationDate>2012-08-22T15:40:41</modificationDate>
<timezone>Europe/Zurich</timezone>
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 <track>Plenary Sessions</track>
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  <name>oral presentation</name>
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 <title>The BIRN Project:  Distributed Information Infrastructure and Multi-scale Imaging of the Nervous System (BIRN = Biomedical Informatics Research Network)</title>
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   <title></title>
   <name first="M." middle="" last="Ellisman"></name>
   <organization>National Center for Microscopy and Imaging Research of the Center for Research in Biological Systems - The Department of Neurosciences, University of California San Diego School of Medicine - La Jolla, California - USA</organization>
   <email>mark@ncmir.ucsd.edu</email>
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   <title></title>
   <name first="M." middle="" last="Ellisman"></name>
   <organization>National Center for Microscopy and Imaging Research of the Center for Research in Biological Systems - The Department of Neurosciences, University of California San Diego School of Medicine - La Jolla, California - USA</organization>
   <email>mark@ncmir.ucsd.edu</email>
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  <name>Interlaken, Switzerland</name>
  <address></address>
  <room>Kongress-Saal</room>
 </location>
 <startDate>2004-09-28T11:00:00</startDate>
 <endDate>2004-09-28T11:30:00</endDate>
 <duration>00:30</duration>
 <abstract>The grand goal in neuroscience research is to understand how the interplay of 
structural, chemical and electrical signals in nervous tissue gives rise to 
behavior.  Experimental advances of the past decades have given the individual 
neuroscientist an increasingly powerful arsenal for obtaining data, from the level 
of molecules to nervous systems. Scientists have begun the arduous and challenging 
process of adapting and assembling neuroscience data at all scales of resolution and 
across disciplines into computerized databases and other easily accessed sources.  
These databases will complement the vast structural and sequence databases created 
to catalogue, organize and analyze gene sequences and protein products. The general 
premise of the neuroscience goal is simple; namely that with "complete" knowledge of 
the genome and protein structures accruing rapidly we next need to assemble an 
infrastructure that will facilitate acquisition of an understanding for how 
functional complexes operate in their cell and tissue contexts.  Our U.C. San Diego-
based group is leading several interdisciplinary projects around this grand 
challenge.  We are evolving a shared infrastructure that allows for mapping 
molecular and cellular brain anatomy in the context of a shared multi-scale mouse 
brain atlas system, the Cell-Centered Database (CCDB).  Complementary to these 
neuroinformatics activities at the National Center for Microscopy and Imaging 
Research in San Diego (NCMIR) we have developed new molecular labeling methods 
compatible with advanced ultra-wide field laser-scanning light microscopy and multi-
resolution 3 dimensional electron microscopy.  These new labeling and imaging 
methods are being used to populate the CCDB, using as a driver mouse models of 
neurological and neuropsychiatric disorders. The informatics framework is 
facilitating cooperative work by distributed teams of scientists engaged in focused 
collaborations aimed to deliver new fundamental understanding of structures on the 
scale of 1 nm3 to 10's of µm3, a dimensional range that encompasses macromolecular 
complexes, organelles, and multi-component structures like synapses and the cellular 
interactions in the context of the complex organization of the entire nervous 
system. This is a unique and pioneering effort that links new neuroscience 
techniques and revolutionary advances in information technology.  Database 
federation tools are critical to the scalability of these efforts and future 
development plans will be described in the context of the NIH-supported project to 
create a new framework for collaboration and data integration in the Biomedical 
Informatics Research Network (BIRN).  BIRN is the leading example of a virtual 
database effort that is using the challenge of federating multi-scale distributed 
data about the nervous systems to help guide the evolution of an International 
Cyberinfrastructure serving all science disciplines, including biomedicine.</abstract>
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  <ID>0</ID>
  <title>Biography</title>
  <description>Mark Ellisman is Professor of Neurosciences and Bioengineering, and Director of the Center for Research in Biological Systems at University of California, San Diego (UCSD). Prof. Ellisman's research is focused on the development and application of advanced imaging technologies to obtain new information about cell structure and function – particularly in the nervous system. His scientific contributions include work on basic molecular and cellular mechanisms of the nervous system and development of advanced technologies in microscopy and computational biology. He is a pioneer in the development of three dimensional light and electron microscopy and combined application of these image acquisition tools and computational technologies to achieve greater understanding of the structure and function of the nervous system. His group was the first to introduce the idea of "Telemicroscopy" by demonstrating the network-enabled remote use and sharing of a high energy electron microscope in 1992, later developing practical systems now in use by researchers in the US and abroad. In 2001, he began a new role leading the development of a Biomedical Informatics Research Network (BIRN) to provide a framework for multiscale imaging infrastructure linking the major neuroimaging centers around the world.</description>
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