Name: Dynamics of biological systems: from viruses to populations
Start: 2020-09-23T09:00:00+02:00
End: 2020-09-25T18:00:00+02:00
Location: No location set

Dynamics of biological systems: from viruses to populations

from Wednesday, September 23, 2020 (9:00 AM) to Friday, September 25, 2020 (6:00 PM)

Monday, September 21, 2020
Tuesday, September 22, 2020
Wednesday, September 23, 2020

10:00 AM Opening remarks
Opening remarks
10:00 AM - 10:10 AM
10:10 AM Viruses
Viruses
10:10 AM - 1:00 PM
Contributions

10:10 AM Emergence of COVID-19 – ground for its evolutionary success - Janusz Kocik (School for Public Health, Centre of Postgraduate Medical Education Warsaw, Poland)

10:50 AM SARS-CoV-2 Vaccine Development: Incorporating AI into epitope-based vaccine design - Piotr Skoczylas (Ardigen)

11:40 AM Modelling disease ecology - Fakhteh Ghanbarnejad (Sharif University of Technology)

12:10 PM Super-spreading events initiated the exponential growth phase of COVID-19 with R0 higher than initially estimated - Marek Kochańczyk (Institute of Fundamental Technological Research PAS)

12:40 PM Social distancing in pedestrian dynamics and its effect on disease spreading - Sina Sajjadi (Sharif University of Technology) Alireza Hashemi (Sharif University of Technology) Fakhteh Ghanbarnejad (Sharif University of Technology)
1:00 PM Lunch break
Lunch break
1:00 PM - 2:00 PM
2:00 PM Bacteria
Bacteria
2:00 PM - 4:55 PM
Contributions

2:00 PM Drug interactions between translation-inhibiting antibiotics - Tobias Bollenbach (University of Cologne)

2:40 PM Ribosome traffic jams underlie suppressive drug interactions - Bor Kavčič (IST Austria)

3:00 PM To make things simpler: classical Powell's ideas for describing bacterial population revisited. - Marcin Rubin (Institute of Physical Chemistry PAS)

3:15 PM High-throughput screening and selection of electrogenic microbial communities using single chamber microbial fuel cells based on 96-well plate array - Lukasz Szydlowski (Jagiellonian University)

3:35 PM Eco-evolutionary interactions in polymicrobial infections - Marjon de Vos (RUG)

4:05 PM Building clone-consistent ecosystem models - Gerrit Ansmann (University of Cologne)

4:25 PM Genomic epidemiology, sex & evolution of bacterial sugars - Rafał Mostowy
4:55 PM Coffee Break
Coffee Break
4:55 PM - 5:00 PM

5:00 PM Mindfulness for Academics
Mindfulness for Academics
5:00 PM - 5:30 PM
Thursday, September 24, 2020
10:00 AM Cells I
Cells I
10:00 AM - 1:00 PM
Contributions

10:00 AM Modelling planar polarised cell behaviours in epithelial tissues - Alexander Fletcher (University of Sheffield)

10:40 AM Epithelial dynamics during mouse neural tube development - Laura Bocanegra-Moreno (IST)

11:00 AM Active organelle dynamics facilitates precise sensing of fluctuating signals - Felix Jonathan Meigel (Max Planck Institute for the Physics of Complex Systems)

11:40 AM Cell Fate Clusters in ICM Organoids Arise from Cell Fate Heredity & Division – a Modelling Approach - Tim Liebisch (Goethe University Frankfurt am Main)

12:00 PM Setting up the epigenome: a collective phenomenon - Steffen Rulands

12:30 PM Stochasticity and mechanics of stem cell fate in intestinal crypts - Edouard Hannezo (IST Austria)
1:00 PM Lunch break
Lunch break
1:00 PM - 2:00 PM
2:00 PM Cells II
Cells II
2:00 PM - 3:55 PM
Contributions

2:00 PM Dynamics of cell migration process - Zenon Rajfur (Faculty of Physics, Astronomy and Applied Computer Science, Jagiellonian University)

2:40 PM Chemotaxis impact on a Turing reaction-diffusion system - Camile Fraga Delfino Kunz (Goethe University Frankfurt)

2:55 PM How cell growth, division, and stochastic gene expression contribute to the protein noise floor - Anna Ochab-Marcinek (Institute of Physical Chemistry, Polish Academy of Sciences)

3:25 PM The many ends of a never-ending story: Deriving the Drosophila gap gene system by ab-initio optimization - Thomas Sokolowski (Frankfurt Institute for Advanced Studies (FIAS))
3:55 PM Coffee Break
Coffee Break
3:55 PM - 4:00 PM

4:00 PM Social Event
Social Event
4:00 PM - 5:00 PM
Friday, September 25, 2020
10:00 AM Populations
Populations
10:00 AM - 1:00 PM
Contributions

10:00 AM Intermediate social bonds and the evolution of reproductive cooperation - Szymon Drobniak (University of New South Wales; Jagiellonian University)

10:40 AM Specialization and plasticity in a primitively social insect - Adolfo Alsina (MPI for the Physics of Complex Systems)

11:00 AM A part‐dependent account of biological individuality: why holobionts are individuals and ecosystems simultaneously - Javier Suárez (Bielefeld University) Adrian Stencel (Jagiellonian University)

11:40 AM Pattern formation in a predator-prey model with defense in fearful prey - Purnedu Mishra (University of Warsaw)

12:00 PM Uncertainties and epidemics spread - Bartlomiej Dybiec (Institute of Theoretical Physics, Jagiellonian University)

12:30 PM How unicellular yeast form a community for the benefit of long-term survival. - Dominika Wloch-Salamon (Jagiellonian University)
1:00 PM Lunch break
Lunch break
1:00 PM - 2:00 PM
2:00 PM Medical Biology
Medical Biology
2:00 PM - 4:55 PM
Contributions

2:00 PM Predictive models of bacterial response and the evolution of resistance to antibiotics - Bartlomiej Waclaw

2:40 PM Mathematical Investigation of Early Atherosclerosis - Debasmita Mukherjee (Department of Statistics, Sunandan Divatia School of Science,SVKM's NMIMS (Deemed to be) University)

3:00 PM Challenges in the Boron Neutron Capture Therapy - Michal Silarski (Jagiellonian University)

3:30 PM Bio-electric phenomena during growth and regeneration - Jan Jedryszek (Jagiellonian University)

3:45 PM Structural and Functional Genomics of the Human Gut Microbiome - Tomasz Kościółek

4:15 PM [CANCELLED] Coagulation cascade as a dynamic biological system - Ewa Stępień (Uniwersytet Jagiellonski)
4:55 PM Closing Remarks
Closing Remarks
4:55 PM - 5:00 PM

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