Alice Weekly Meeting: Software for Hardware Accelerators / PDP-SRC

Wednesday 12 Feb 2025, 10:00 → 11:30 Europe/Zurich

1 Discussion

Speakers: David Rohr (CERN), Giulio Eulisse (CERN)

2 Following up JIRA tickets

Speaker: Ernst Hellbar (CERN)

3 TPC ML Clustering

Speaker: Christian Sonnabend (CERN, Heidelberg University (DE))

4 ITS Tracking

Speaker: Matteo Concas (CERN)

ITS GPU tracking

• General priorities:
  • Focusing on porting all of what is possible on the device, extending the state of the art, and minimising computing on the host.
    • Tracking fully ported on GPU (#13907, #13899).
    • Moving vertexing routines to the externally managed memory system. -> WIP
• Next required developments:
  • Thrust allocator with external memory management -> possibly the most critical missing piece, to found a decent way of introducing it.
  • Asynchronous parallelisation in the tracklet finding, i.e. Multi-streaming for obvious parallelisations.
• Optimizations:
  • intelligent scheduling and multi-streaming can happen right after.
  • Kernel-level optimisations to be investigated.

TODO:

• • Reproducer for HIP bug on multi-threaded track fitting: no follow-up yet.
  • Fix possible execution issues and known discrepancies when using gpu-reco-workflow: no progress.

DCAFitterGPU

• Deterministic approach via using SMatrixGPU on the host, under particular configuration: no progress.

5 TPC Track Model Decoding on GPU

Speaker: Gabriele Cimador (Universita e INFN Trieste (IT))

General summary on GPU param optimisation

Can we optimize parameters individually, and which parameters do we have to optimize globally?

Image below is the GPU sync TPC processing chain. Each colored box is a GPU kernel, time flows in this direction -->.

Drawn following conclusions:

• Compression and decompression steps: these steps contain kernels which do not execute concurrently. Parameters are independent and can be optimised separately.
• Clusterizer step: small concurrent kernels, dependent parameters, need global optimisation.
• TrackingSlices step: medium concurrent kernels, dependent parameters, need global optimisation.
•  Merger step: mix of medium/long single stream kernels and small concurrent kernels. Some parameters can be optimisied individually while concurrent kernels require global opt.

Are the optimal parameters the same for different input data pp vs PbPb and low vs high IR?

Measured on Alma 9.4, ROCm 6.3.1, MI50 GPU. Tested four different configurations: pp 100kHz, pp 2MHz, PbPb 5kHz and PbPb 50kHz. Simulated TFs with 128 lhc orbits.

Independent params optimisation

• Grid search approach. Block size is multiple of warp size (64 for AMD EPN GPUs), Grid size is multiple of number of Streaming Multiprocessors (Compute Units in AMD jargon).
• Each indepedent kernel has a custom search space, and can be studied separately from the others
• Created automated measurements routine, capable of executing multiple grid searches on different independent kernels 

• Executed grid search for the following kernels:

  • MergerTrackFit

  • MergerFollowLoopers

  • MergerSliceRefit
  • MMergerCollect
  • CompressionKernels_step0attached
  • CompressionKernels_step1unattached
     

MergerTrackFit

Executed two times (Merger 1 and Merger 2)

pp

Merger 1

• Low IR same performance as normal configuration (grid size dependent on number of tracks)
• High IR same as low IR, except for (64,240) where it also has the same performance as normal

Merger 2

• Low and High IR sync benefits from bigger grid sizes
• High IR async is 34% faster with higher grid sizes than current configuration for async

PbPb

Merger 1

• Larger grid sizes almost reaches current configuration (grid_size * block_size >= n_tracks)

Merger 2

• Low IR can be 10% faster with bigger grid sizes
• High IR is 40% faster with bigger grid sizes

MergerSliceRefit

Kernel is executed 36 times (once per TPC sector).

• pp low IR benefits from lower block sizes
• pp high IR benefits from larger grid and block sizes
• PbPb low IR better with lower block sizes
• PbPb high IR better with larger grid and block sizes

MergerCollect

pp

Overall best performance given by (64, 960), while current configuration is (512,60).

PbPb

Roughly same as pp

MergerFollowLoopers

Best configuration uses 900 or 960 as grid size. Current configuration is (256,200).

Compression kernels

Step 0 attached clusters

No significant improvements when changing grid and block sizes.

Step 1 unattached clusters

No significant improvements when changing grid and block sizes.

After grid search

Create set of best parameters per beamtype (pp, PbPb) and per IR (100kHz, 2MHz for pp and 5kHz, 50kHz for PbPb). How to choose best configuration:

1. compute conf_mean_time - default_conf_mean_time
2. propagate error (std dev) of the difference and compute 95% confidence interval
3. if 0 is in the interval, can not tell with confidence if current configuration is better than the default
4. if one or more CIs have upperbound < 0, choose the one with smaller mean (i.e. the best)

Plug in the best parameters for each beamtype / IR configuration and check if there is a noticable improvement in the whole sync / async chain (work in progress).

Dependent params optimisation

• More difficult to tackle. Group kernels which run in parallel and optimise this set.
• Identified following kernels which are the longest which are concurrently executed with other kernels:
  • CreateSliceData
  • GlobalTracking
  • TrackletSelector
  • NeighboursFinder
  • NeighboursCleaner
  • TrackletConstructor_singleSlice
• Started with grid search approach on TrackletConstructor_singleSlice. Measured both kernel mean execution time and whole SliceTracking execution time, as chaning parameters may influence the execution time of other kernels and thus on the whole SliceTracking slice.
• Block size is multiple of warp size (64 for AMD EPN GPUs), Grid size is multiple of number of Streaming Multiprocessors (Compute Units in AMD jargon).
• Each indepedent kernel has a custom search space, and can be studied separately from the others.

Possible ideas for post manual optimization

1. Isolate the parameters which are dependent, i.e. kernels from the same task which run in parallel (e.g. Clusterizer step, SliceTracking slice)
2. Apply known optimization techniques to such kernel groups
   1. Grid/random search
   2. Bayesian optimization?
      See: F.-J. Willemsen, R. Van Nieuwpoort, and B. Van Werkhoven, “Bayesian Optimization for auto-tuning GPU kernels”, International Workshop on Performance Modeling, Benchmarking and Simulation of High Performance Computer Systems (PMBS) at Supercomputing (SC21), 2021. Available: https://arxiv.org/abs/2111.14991

Possible bug spotted

HIP_AMDGPUTARGET set to "default" in GPU/GPUTracking/Standalone/cmake/config.cmake translates in HIP_AMDGPUTARGET=gfx906;gfx908 and forces to use MI50 params

Basically here HIP_AMDGPUTARGET=gfx906;gfx908 enters the first if clause for MI50 even if I am compiling for MI100. Commented set(HIP_AMDGPUTARGET "default") on the config.cmake of the standalone benchmark and forced usage of MI100 parameters via

cmake -DCMAKE_INSTALL_PREFIX=../ -DHIP_AMDGPUTARGET="gfx908" ~/alice/O2/GPU/GPUTracking/Standalone/

Did not investigate further on this.

6 Efficient Data Structures

Speaker: Dr Oliver Gregor Rietmann (CERN)