15–17 Sept 2025
CERN
Europe/Zurich timezone

Talk Data to Me: Conversational AI for FAIR and Accessible Biomedical Data Discovery

-18
Not scheduled
1h 30m
80/1-001 - Globe of Science and Innovation - 1st Floor (CERN)

80/1-001 - Globe of Science and Innovation - 1st Floor

CERN

60
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Demo Open, but at What Cost? Research Security & Open Science Poster & Demos Sessions

Description

The biomedical research ecosystem is rich in data but poor in discoverability. Researchers often struggle to identify and evaluate datasets across fragmented platforms, inconsistent metadata schemas, and access-restricted environments. Traditional search interfaces fail to accommodate the exploratory and interdisciplinary nature of modern research.

We propose a new paradigm: using conversational AI to transform metadata search into natural dialogue. Powered by large language models, the chatbot prototype on Synapse.org interprets user intent, translates natural language into structured queries, and surfaces metadata summaries—enabling ethical and efficient discovery even in regulated domains.

Users can ask nuanced questions like “Which Alzheimer's datasets involve Type II Diabetes in patients over 60?” and receive synthesized metadata responses, access notes, and provenance trails. The chatbot supports non-technical users and facilitates equitable access by acting as a semantic translator between scientific domains. Moreover, logs of user queries inform improvements in metadata quality and usability.

This presentation will discuss how conversational interfaces can bridge technical, linguistic, and policy gaps in data discovery—particularly for regulated data that must remain access-controlled. It also explores the integration of safeguards such as access permissions, response transparency, and bias auditing.

We argue that conversational AI is not just an interface improvement, but a step toward inclusive and intuitive open science infrastructure.

Tagline

Turning biomedical metadata search into a conversation

Keywords Conversational AI, metadata discovery, biomedical data, FAIR principles

Authors

Alberto Pepe Dr Luca Foschini (Sage Bionetworks) Robert Allaway (Sage Bionetworks) Susheel Varma (Sage Bionetworks)

Presentation materials

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