6–11 Jun 2021
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America/Toronto timezone
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(G*) The Journey of a single polymer chain to a nanopore

10 Jun 2021, 13:00
3m
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Underline Conference System

Oral Competition (Graduate Student) / Compétition orale (Étudiant(e) du 2e ou 3e cycle) Condensed Matter and Materials Physics / Physique de la matière condensée et matériaux (DCMMP-DPMCM) R2-6 Contributed Talks V (DCMMP) / Conférences soumises V (DPMCM)

Speaker

Mr Navid Afrasiabian (University of Western Ontario)

Description

The delivery of a polymer chain from the chamber of origin to the destination through a nano-scale pore (nanopore) is called polymer translocation. Transport of RNA and DNA inside and into cells, virus Injection, and drug delivery are only a few examples of biological processes that polymer translocation plays a key role in. Prior to translocation, however, the chain must first find the nanopore. This so-called polymer capture has a significant impact on the conformation of the translocation. Two possible capture conformations are considered single-file and single-folded (hairpin) conformations. Our molecular dynamics-lattice Boltzmann simulations show that the presence of hydrodynamic flow facilitates the finding process as well as fostering the single-file insertion by a hairpin-unravelling mechanism, namely, the pulley effect.

Primary author

Mr Navid Afrasiabian (University of Western Ontario)

Co-author

Dr Colin Denniston (University of Western Ontario)

Presentation materials

There are no materials yet.