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BioDynaMo Workshop on Agent-Based Modeling
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Europe/Zurich
Zoom
Zoom
Fons Rademakers
(CERN),
Roman Bauer
Description
An open-source software platform to easily create, run, and visualise agent-based simulations
This workshop highlights the latest developments in the BioDynaMo core. Many ongoing projects and new use-cases will be presented, showing the power of agent-based modeling.
Registration
Registration for zoom details
Participants
Zoom Meeting ID
62784035671
Host
Fons Rademakers
Alternative hosts
Kristina Gunne, Lukas Breitwieser
Useful links
Join via phone
Zoom URL
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10:00
→
10:05
Introduction 5mSpeaker: Roman Bauer
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10:05
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10:20
The BioDynaMo Platform: Current State and Future Developments 15mSpeakers: Fons Rademakers (CERN), Lukas Breitwieser (CERN, ETH Zurich)
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10:20
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10:40
From multicellular to tissue biomechanics simulations in cancer using multiscale finite element and agent-based models 20mSpeaker: Vasileios Vavourakis (University of Cyprus / UCL)
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10:40
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11:00
Emergence and Macroscopic Behaviour ExtRaction (EMBER): a tool for bifurcation analysis of agent-based models 20mSpeaker: Anne Skeldon (University of Surrey)
- 11:00 → 11:10
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11:10
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11:30
Coffee break 20m
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11:30
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11:50
Agent-based modelling of radiation-induced lung fibrosis 20mSpeaker: Nicolo Cogno (TU Darmstadt / GSI Helmholtz Centre)
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11:50
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12:10
Agent-based modelling of multi-state biomolecules 20mSpeaker: Melanie Stefan (Edinburgh University)
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12:10
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12:30
CryoDynaMo for cryopreservation simulations 20mSpeaker: Jack Jennings (Newcastle University)
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12:30
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13:30
Lunch break 1h
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13:30
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13:50
Cryopreservation: a Time Travel Machine 20mSpeaker: Ramon Risco (University of Seville)
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13:50
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14:10
Leveraging Machine Learning for efficient agent-based simulations and application on biomedical cases 20mSpeaker: Taghi Aliyev (SCImPULSE Foundation)
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14:10
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14:30
Open discussion on presentations and overlap 20m
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14:30
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14:50
Development and calibration of an agent-based model of tumor growth 20mSpeaker: Ernesto Lima (The University of Texas at Austin)
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14:50
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15:10
Agent-Based Modeling of Financial Markets 20mSpeaker: Philippe Debie (WUR)
- 15:10 → 15:20
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15:20
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15:30
Coffee break 10m
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15:30
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15:50
Agent-based models for socioeconomic simulations 20mSpeaker: Frank Pijpers (University of Amsterdam / Statistics Netherlands)
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15:50
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16:10
Modelling of mosquito borne diseases and ML applications to their forecast 20mSpeaker: Flavio Coelho (University of Geneva)
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16:10
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16:30
Individual-based mathematical model of HIV transmission and its implementation for Malawi 20mSpeaker: Janne Anton Markus Estill (University of Geneva)
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16:30
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16:50
Knowledge Transfer and IP in academic and industrial research 20mSpeaker: Han Hubert Dols (CERN)
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16:50
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17:00
Concluding remarks 10mSpeaker: Roman Bauer
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17:00
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17:30
Open discussion on presentations and opportunities 30m
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10:00
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10:05
